Package: AiES
Type: Package
Title: Axon Integrity Evaluation System for Microscopy Images
Version: 0.99.6
Authors@R: c(
  person("Shinji", "Tokunaga", email = "tokunaga@ncnp.go.jp", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8398-3054")),
  person("Masafumi", "Funakoshi", email = "funakoshi@ncnp.go.jp", role = "ctb"),
  person("Toshiyuki", "Araki", email = "taraki@ncnp.go.jp", role = "ctb", comment = c(ORCID = "0000-0003-3625-2042"))
  )
Maintainer: Shinji Tokunaga <tokunaga@ncnp.go.jp>
Description: Provides tools for the quantitative analysis of axon integrity in microscopy images. 
  It implements image pre-processing, adaptive thresholding, feature extraction, and support vector machine-based classification to compute indices such as the Axon Integrity Index (AII) and Degeneration Index (DI).
  The package is designed for reproducible and automated analysis in neuroscience research.
License: BSD_3_clause + file LICENSE
Copyright: 2025 National Center of Neurology and Psychiatry
Encoding: UTF-8
RoxygenNote: 7.3.2
URL: https://github.com/BreezyCave/AiES
BugReports: https://github.com/BreezyCave/AiES/issues
Imports: EBImage, e1071, stats, fs, data.table
Suggests: utils, stringr, colorspace, dplyr, knitr, tcltk, rstudioapi,
        svDialogs
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2025-06-04 15:58:48 UTC; 20040
Author: Shinji Tokunaga [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8398-3054>),
  Masafumi Funakoshi [ctb],
  Toshiyuki Araki [ctb] (ORCID: <https://orcid.org/0000-0003-3625-2042>)
Repository: CRAN
Date/Publication: 2025-06-06 12:50:12 UTC
Built: R 4.6.1; ; 2026-07-02 02:20:46 UTC; windows
