Package: AHMbook
Type: Package
Title: Functions and Data for the Book 'Applied Hierarchical Modeling
        in Ecology' Vols 1 and 2
Version: 0.2.12
Date: 2026-04-14
Depends: R (>= 2.10)
Imports: grDevices, graphics, methods, stats, utils, unmarked (>=
        0.12.2), mvtnorm
Suggests: coda, fields, raster, sp, spdep
Authors@R: c(
  person("Marc", "Kéry", role="aut"),
  person("Andy", "Royle", role="aut"),
  person("Mike", "Meredith", role="aut"),
  person("Ken", "Kellner", role=c("ctb", "cre"), email="contact@kenkellner.com", comment="simIDS"),
  person("Urs", "Breitenmoser", role="dtc", comment="EurasianLynx"),
  person("Richard", "Chandler", role="ctb"),
  person("Bob", "Dorazio", role="ctb"),
  person("Evan", "Grant", role="dtc", comment="duskySalamanders"),
  person("John-Andren", "Henden", role="dtc", comment="Finnmark"),
  person("Roland", "Kays", role="dtc", comment="MesoCarnivores"),
  person("David", "King", role="dtc", comment="cswa"),
  person("Xavier", "Lambin", role="dtc", comment="waterVoles"),
  person("Jeremy", "Mizel", role=c("ctb", "dtc"), comment="treeSparrow"),
  person("Anja", "Molinari-Jobin", role="dtc", comment="EurasianLynx"),
  person("René-Jean", "Monneret", role="dtc", comment="FrenchPeregrines"),
  person("Arielle", "Parsons", role="dtc", comment="MesoCarnivores"),
  person("René", "Ruffinoni", role="dtc", comment="FrenchPeregrines"),
  person("Michael", "Schaub", role="ctb"),
  person("Rahel", "Solmann", role="ctb"),
  person("Nicolas", "Strebel", role="dtc"),
  person("Chris", "Sutherland", role=c("ctb", "dtc"), comment="waterVoles"),
  person("Mathias", "Tobler", role="ctb"),
  person("Gesa", "von Hirschheydt", role="ctb", comment="simOccCat"),
  person("Fridolin", "Zimmermann", role="dtc", comment="EurasianLynx"),
  person("Aargau Biodiversity Monitoring Program (LANAG)", role="dtc", comment="SwissMarbledWhite"),
  person("British Ornithological Trust", role="dtc", comment="willowWarbler, UKmarbledWhite, <https://www.bto.org/>"),
  person("Butterfly Conservation", role=c("dtc", "cph"), comment="UKmarbledWhite, <https://butterfly-conservation.org>"),
  person("Centre for Ecology & Hydrology", role=c("dtc", "cph"), comment="UKmarbledWhite, <https://www.ceh.ac.uk>"),
  person("Dutch Centre for Field Ornithology (Sovon)", role="dtc", comment="wagtail, <https://www.sovon.nl>"),
  person("eMammal", role="dtc", comment="MesoCarnivores, <https://emammal.si.edu/>"),
  person("Groupe Pèlerin Jura", role="dtc", comment="FrenchPeregrines"),
  person("Hubbard Brook Ecosystem Study", role="dtc", comment="HubbardBrook, <http://data.hubbardbrook.org/data/dataset.php?id=178>"),
  person("Joint Nature Conservation Committee (JNCC)", role=c("dtc", "cph"), comment="UKmarbledWhite, <https://jncc.gov.uk/>"),
  person("North Carolina Museum of Natural Sciences", role="dtc", comment="mesoCarnivores"),
  person("North Carolina State University", role="dtc", comment="mesoCarnivores"),
  person("Progetto Lince Italia", role="dtc", comment="EurasianLynx, <https://www.progettolinceitalia.it>"),
  person("Swiss Federal Statistical Office", role=c("dtc", "cph"), comment="BerneseOberland, <http://www.bfs.admin.ch>"),
  person("Swiss Foundation KORA Carnivore Ecology and Wildlife Management (SCALP project)", role="dtc", comment="EurasianLynx, <https://www.kora.ch>"),
  person("Swiss Ornithological Institute", role="dtc", comment="<https://www.vogelwarte.ch>"),
  person("UK Butterfly Monitoring Scheme (UKBMS)", role=c("dtc", "cph"), comment="UKmarbledWhite, <https://www.ceh.ac.uk/our-science/projects/uk-butterfly-monitoring-scheme>"))
Description: Provides functions to simulate data sets from hierarchical ecological models, including all the simulations described in the two volume publication 'Applied Hierarchical Modeling in Ecology: Analysis of distribution, abundance and species richness in R and BUGS' by Marc Kéry and Andy Royle: volume 1 (2016, ISBN: 978-0-12-801378-6) and volume 2 (2021, ISBN: 978-0-12-809585-0), <https://www.mbr-pwrc.usgs.gov/pubanalysis/keryroylebook/>. It also has all the utility functions and data sets needed to replicate the analyses shown in the books.
License: GPL (>= 3)
Copyright: file COPYRIGHTS
NeedsCompilation: no
URL: https://www.mbr-pwrc.usgs.gov/pubanalysis/keryroylebook/
BugReports: https://github.com/ecoverseR/AHMbook/issues
Encoding: UTF-8
Language: en-US
Packaged: 2026-04-14 14:11:36 UTC; ken
Author: Marc Kéry [aut],
  Andy Royle [aut],
  Mike Meredith [aut],
  Ken Kellner [ctb, cre] (simIDS),
  Urs Breitenmoser [dtc] (EurasianLynx),
  Richard Chandler [ctb],
  Bob Dorazio [ctb],
  Evan Grant [dtc] (duskySalamanders),
  John-Andren Henden [dtc] (Finnmark),
  Roland Kays [dtc] (MesoCarnivores),
  David King [dtc] (cswa),
  Xavier Lambin [dtc] (waterVoles),
  Jeremy Mizel [ctb, dtc] (treeSparrow),
  Anja Molinari-Jobin [dtc] (EurasianLynx),
  René-Jean Monneret [dtc] (FrenchPeregrines),
  Arielle Parsons [dtc] (MesoCarnivores),
  René Ruffinoni [dtc] (FrenchPeregrines),
  Michael Schaub [ctb],
  Rahel Solmann [ctb],
  Nicolas Strebel [dtc],
  Chris Sutherland [ctb, dtc] (waterVoles),
  Mathias Tobler [ctb],
  Gesa von Hirschheydt [ctb] (simOccCat),
  Fridolin Zimmermann [dtc] (EurasianLynx),
  Aargau Biodiversity Monitoring Program (LANAG) [dtc]
    (SwissMarbledWhite),
  British Ornithological Trust [dtc] (willowWarbler, UKmarbledWhite,
    <https://www.bto.org/>),
  Butterfly Conservation [dtc, cph] (UKmarbledWhite,
    <https://butterfly-conservation.org>),
  Centre for Ecology & Hydrology [dtc, cph] (UKmarbledWhite,
    <https://www.ceh.ac.uk>),
  Dutch Centre for Field Ornithology (Sovon) [dtc] (wagtail,
    <https://www.sovon.nl>),
  eMammal [dtc] (MesoCarnivores, <https://emammal.si.edu/>),
  Groupe Pèlerin Jura [dtc] (FrenchPeregrines),
  Hubbard Brook Ecosystem Study [dtc] (HubbardBrook,
    <http://data.hubbardbrook.org/data/dataset.php?id=178>),
  Joint Nature Conservation Committee (JNCC) [dtc, cph] (UKmarbledWhite,
    <https://jncc.gov.uk/>),
  North Carolina Museum of Natural Sciences [dtc] (mesoCarnivores),
  North Carolina State University [dtc] (mesoCarnivores),
  Progetto Lince Italia [dtc] (EurasianLynx,
    <https://www.progettolinceitalia.it>),
  Swiss Federal Statistical Office [dtc, cph] (BerneseOberland,
    <http://www.bfs.admin.ch>),
  Swiss Foundation KORA Carnivore Ecology and Wildlife Management (SCALP
    project) [dtc] (EurasianLynx, <https://www.kora.ch>),
  Swiss Ornithological Institute [dtc] (<https://www.vogelwarte.ch>),
  UK Butterfly Monitoring Scheme (UKBMS) [dtc, cph] (UKmarbledWhite,
    <https://www.ceh.ac.uk/our-science/projects/uk-butterfly-monitoring-scheme>)
Maintainer: Ken Kellner <contact@kenkellner.com>
Repository: CRAN
Date/Publication: 2026-04-15 07:10:25 UTC
Built: R 4.7.0; ; 2026-07-03 03:26:30 UTC; windows
